Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 ABCD1P5-201ENST00000445663 754 ntBASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 IGHV3-52-201ENST00000519770 353 ntBASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.59■□□□□ 0.41
LYSMD3Q7Z3D4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.58■□□□□ 0.41
LYSMD3Q7Z3D4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 RN7SL510P-201ENST00000581311 263 ntBASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LYSMD3Q7Z3D4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AKR1C7P-201ENST00000305623 895 ntBASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AC004870.1-201ENST00000315132 882 ntBASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AC073592.5-201ENST00000624854 528 ntBASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 AP000867.4-201ENST00000641616 219 ntBASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LYSMD3Q7Z3D4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 AC132938.5-201ENST00000624980 1813 ntBASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 REXO1L6P-202ENST00000619970 1078 ntBASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LYSMD3Q7Z3D4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms