Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 MYCLP1-201ENST00000372451 1075 ntBASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 PTCHD3P3-201ENST00000403073 906 ntBASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 LINC00982-205ENST00000420957 435 ntBASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 AC092865.6-201ENST00000642101 219 ntBASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC62Q6P9F0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 AC104581.1-202ENST00000635932 2618 ntBASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 AP001160.2-201ENST00000596071 487 ntBASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC62Q6P9F0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 IGLL3P-201ENST00000412472 434 ntBASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 MIR4751-201ENST00000578027 74 ntBASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC62Q6P9F0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 AP002414.1-201ENST00000391405 1147 ntBASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 AC004967.1-201ENST00000453589 447 ntBASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC62Q6P9F0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms