Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASC4Q6P4E1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 AC022211.2-201ENST00000585075 2527 ntBASIC17.88■□□□□ 0.45
CASC4Q6P4E1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
CASC4Q6P4E1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 Z83836.1-201ENST00000624605 1642 ntBASIC17.87■□□□□ 0.45
CASC4Q6P4E1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 AC068472.1-201ENST00000474589 881 ntBASIC17.87■□□□□ 0.45
CASC4Q6P4E1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CASC4Q6P4E1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CASC4Q6P4E1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms