Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.32■□□□□ 0.2
REEP3Q6NUK4 AC060834.1-201ENST00000443027 2032 ntBASIC16.32■□□□□ 0.2
REEP3Q6NUK4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 AC092647.4-201ENST00000457211 535 ntBASIC16.32■□□□□ 0.2
REEP3Q6NUK4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 RNF126P1-202ENST00000569893 925 ntBASIC16.32■□□□□ 0.2
REEP3Q6NUK4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
REEP3Q6NUK4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 KRT18P57-201ENST00000443599 1254 ntBASIC16.31■□□□□ 0.2
REEP3Q6NUK4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AC006011.2-201ENST00000621313 1158 ntBASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
REEP3Q6NUK4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 IGHV3-52-201ENST00000519770 353 ntBASIC16.3■□□□□ 0.2
REEP3Q6NUK4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 AC106886.4-201ENST00000623557 2502 ntBASIC16.3■□□□□ 0.2
REEP3Q6NUK4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
REEP3Q6NUK4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms