Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 TP73-AS1-210ENST00000637775 1455 ntBASIC20.9■□□□□ 0.94
RNF20Q5VTR2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 MIR1224-201ENST00000408193 85 ntBASIC20.9■□□□□ 0.94
RNF20Q5VTR2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF20Q5VTR2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RNF20Q5VTR2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF20Q5VTR2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF20Q5VTR2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF20Q5VTR2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF20Q5VTR2 NSUN5P1-202ENST00000421140 1535 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 NSUN5P2-203ENST00000457352 1529 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 MIR3180-1-201ENST00000580374 94 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 MIR3180-3-201ENST00000584616 94 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 NPAP1P7-201ENST00000613027 823 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 AL353593.2-201ENST00000602529 1483 ntBASIC20.88■□□□□ 0.93
RNF20Q5VTR2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF20Q5VTR2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 KRT8P10-201ENST00000450021 1447 ntBASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.87■□□□□ 0.93
RNF20Q5VTR2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 IGHV3-47-201ENST00000425060 335 ntBASIC20.87■□□□□ 0.93
RNF20Q5VTR2 ATP5G2P1-201ENST00000433580 426 ntBASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 AC074051.2-201ENST00000565115 352 ntBASIC20.87■□□□□ 0.93
RNF20Q5VTR2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF20Q5VTR2 AP001094.4-201ENST00000579008 2176 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms