Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 AL049757.1-201ENST00000616842 1596 ntBASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPF38BQ5VTL8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 LINC00982-205ENST00000420957 435 ntBASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 TMEM14DP-201ENST00000422205 345 ntBASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 CHCHD2P3-201ENST00000603038 451 ntBASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPF38BQ5VTL8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 SLC25A24P2-201ENST00000415059 510 ntBASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 GNAQP1-201ENST00000444815 1067 ntBASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
PRPF38BQ5VTL8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC099343.3-201ENST00000605834 2503 ntBASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 MIR1247-201ENST00000408206 136 ntBASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 BTBD6P1-201ENST00000412176 1267 ntBASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 GPAA1P2-201ENST00000417923 928 ntBASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC108725.1-201ENST00000495472 409 ntBASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PRPF38BQ5VTL8 AC007431.3-201ENST00000623221 587 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms