Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.07■□□□□ 0.8
USH1GQ495M9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USH1GQ495M9 AC136632.2-201ENST00000512891 861 ntBASIC20.07■□□□□ 0.8
USH1GQ495M9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 AC023511.2-201ENST00000618803 211 ntBASIC20.07■□□□□ 0.8
USH1GQ495M9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
USH1GQ495M9 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USH1GQ495M9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
USH1GQ495M9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.07■□□□□ 0.8
USH1GQ495M9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.07■□□□□ 0.8
USH1GQ495M9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
USH1GQ495M9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.07■□□□□ 0.8
USH1GQ495M9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USH1GQ495M9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.06■□□□□ 0.8
USH1GQ495M9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.06■□□□□ 0.8
USH1GQ495M9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USH1GQ495M9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.06■□□□□ 0.8
USH1GQ495M9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
USH1GQ495M9 TERC-201ENST00000602385 541 ntBASIC20.06■□□□□ 0.8
USH1GQ495M9 AC005593.1-201ENST00000624894 515 ntBASIC20.06■□□□□ 0.8
USH1GQ495M9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.06■□□□□ 0.8
USH1GQ495M9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.06■□□□□ 0.8
USH1GQ495M9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USH1GQ495M9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.06■□□□□ 0.8
USH1GQ495M9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USH1GQ495M9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 AL355312.1-201ENST00000407115 2176 ntBASIC20.05■□□□□ 0.8
USH1GQ495M9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
USH1GQ495M9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
USH1GQ495M9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 AC140113.2-201ENST00000604370 208 ntBASIC20.05■□□□□ 0.8
USH1GQ495M9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.05■□□□□ 0.8
USH1GQ495M9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.05■□□□□ 0.8
USH1GQ495M9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USH1GQ495M9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.04■□□□□ 0.8
USH1GQ495M9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
USH1GQ495M9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.04■□□□□ 0.8
USH1GQ495M9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
USH1GQ495M9 AC009947.1-201ENST00000444350 727 ntBASIC20.04■□□□□ 0.8
USH1GQ495M9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.04■□□□□ 0.8
USH1GQ495M9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
USH1GQ495M9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.04■□□□□ 0.8
USH1GQ495M9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.04■□□□□ 0.8
USH1GQ495M9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USH1GQ495M9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.04■□□□□ 0.8
USH1GQ495M9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms