Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 LINC02012-201ENST00000608206 1725 ntBASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO1Q2MKA7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RSPO1Q2MKA7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 AC003669.1-201ENST00000334569 611 ntBASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ABCD1P5-201ENST00000445663 754 ntBASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 KRT16P4-201ENST00000453883 522 ntBASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RSPO1Q2MKA7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms