Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA1Q09470 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA1Q09470 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNA1Q09470 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 AC111152.3-201ENST00000569699 673 ntBASIC19.21■□□□□ 0.67
KCNA1Q09470 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.21■□□□□ 0.67
KCNA1Q09470 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KCNA1Q09470 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KCNA1Q09470 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
KCNA1Q09470 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.21■□□□□ 0.66
KCNA1Q09470 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNA1Q09470 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNA1Q09470 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 AC106795.1-205ENST00000512851 1056 ntBASIC19.2■□□□□ 0.66
KCNA1Q09470 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.2■□□□□ 0.66
KCNA1Q09470 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.2■□□□□ 0.66
KCNA1Q09470 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNA1Q09470 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 AC009336.1-201ENST00000608941 1553 ntBASIC19.19■□□□□ 0.66
KCNA1Q09470 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KCNA1Q09470 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNA1Q09470 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.19■□□□□ 0.66
KCNA1Q09470 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 AC046185.3-201ENST00000623228 1824 ntBASIC19.19■□□□□ 0.66
KCNA1Q09470 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KCNA1Q09470 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
KCNA1Q09470 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNA1Q09470 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNA1Q09470 AF238378.1-201ENST00000526806 358 ntBASIC19.19■□□□□ 0.66
KCNA1Q09470 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.19■□□□□ 0.66
KCNA1Q09470 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.19■□□□□ 0.66
KCNA1Q09470 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KCNA1Q09470 REXO1L6P-202ENST00000619970 1078 ntBASIC19.19■□□□□ 0.66
KCNA1Q09470 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNA1Q09470 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNA1Q09470 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNA1Q09470 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
KCNA1Q09470 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
KCNA1Q09470 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNA1Q09470 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNA1Q09470 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 LTB4R2-202ENST00000528054 3092 ntBASIC19.18■□□□□ 0.66
KCNA1Q09470 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 AC080080.1-201ENST00000625121 2420 ntBASIC19.18■□□□□ 0.66
KCNA1Q09470 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
KCNA1Q09470 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms