Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 AC011467.2-201ENST00000598425 242 ntBASIC17.06■□□□□ 0.32
YBX1P67809 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YBX1P67809 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 AC133963.1-201ENST00000504166 1679 ntBASIC17.06■□□□□ 0.32
YBX1P67809 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
YBX1P67809 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
YBX1P67809 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
YBX1P67809 INTS4P1-201ENST00000438455 1935 ntBASIC17.06■□□□□ 0.32
YBX1P67809 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YBX1P67809 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YBX1P67809 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 LINC00304-203ENST00000565008 1864 ntBASIC17.05■□□□□ 0.32
YBX1P67809 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.05■□□□□ 0.32
YBX1P67809 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.05■□□□□ 0.32
YBX1P67809 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.05■□□□□ 0.32
YBX1P67809 AC009533.2-201ENST00000543664 586 ntBASIC17.05■□□□□ 0.32
YBX1P67809 MIR5100-201ENST00000579544 119 ntBASIC17.05■□□□□ 0.32
YBX1P67809 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
YBX1P67809 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.05■□□□□ 0.32
YBX1P67809 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.05■□□□□ 0.32
YBX1P67809 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
YBX1P67809 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YBX1P67809 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 AL138688.1-201ENST00000624851 1594 ntBASIC17.04■□□□□ 0.32
YBX1P67809 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 COX5BP2-201ENST00000392354 334 ntBASIC17.04■□□□□ 0.32
YBX1P67809 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.04■□□□□ 0.32
YBX1P67809 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 KRT18P31-201ENST00000506277 1292 ntBASIC17.04■□□□□ 0.32
YBX1P67809 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.04■□□□□ 0.32
YBX1P67809 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.04■□□□□ 0.32
YBX1P67809 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.04■□□□□ 0.32
YBX1P67809 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.04■□□□□ 0.32
YBX1P67809 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 AC116407.2-201ENST00000613639 860 ntBASIC17.04■□□□□ 0.32
YBX1P67809 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.04■□□□□ 0.32
YBX1P67809 AC114341.1-201ENST00000618070 349 ntBASIC17.04■□□□□ 0.32
YBX1P67809 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YBX1P67809 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YBX1P67809 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.04■□□□□ 0.32
YBX1P67809 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms