Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.66■□□□□ 0.1
GFRA1P56159 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GFRA1P56159 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA1P56159 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 AL135999.2-201ENST00000622438 1686 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA1P56159 LINC00982-205ENST00000420957 435 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA1P56159 ACTG1P4-201ENST00000425123 1122 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.65■□□□□ 0.1
GFRA1P56159 RPL13AP23-201ENST00000480739 586 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 AC136632.2-201ENST00000512891 861 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 AC145285.3-201ENST00000564603 959 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 AC106730.1-201ENST00000566722 1090 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
GFRA1P56159 AL353135.1-201ENST00000606729 504 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 MIR1199-201ENST00000621445 119 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 AF228730.7-201ENST00000641842 219 ntBASIC15.65■□□□□ 0.1
GFRA1P56159 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
GFRA1P56159 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA1P56159 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.65■□□□□ 0.1
GFRA1P56159 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GFRA1P56159 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
GFRA1P56159 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.64■□□□□ 0.09
GFRA1P56159 GNAS-203ENST00000306120 1878 ntBASIC15.64■□□□□ 0.09
GFRA1P56159 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.64■□□□□ 0.09
GFRA1P56159 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 ELK2BP-201ENST00000415014 1224 ntBASIC15.64■□□□□ 0.09
GFRA1P56159 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.64■□□□□ 0.09
GFRA1P56159 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 AC006504.4-201ENST00000592118 1568 ntBASIC15.64■□□□□ 0.09
GFRA1P56159 PGM5P2-202ENST00000637225 1043 ntBASIC15.64■□□□□ 0.09
GFRA1P56159 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 BCL2-203ENST00000589955 5011 ntBASIC15.64■□□□□ 0.09
GFRA1P56159 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GFRA1P56159 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.64■□□□□ 0.09
GFRA1P56159 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA1P56159 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
GFRA1P56159 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
GFRA1P56159 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GFRA1P56159 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GFRA1P56159 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA1P56159 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
GFRA1P56159 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms