Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC096633.1-201ENST00000422446 749 ntBASIC17.14■□□□□ 0.33
CDH13P55290 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH13P55290 SPDYE13P-201ENST00000445314 798 ntBASIC17.14■□□□□ 0.33
CDH13P55290 AC092647.4-201ENST00000457211 535 ntBASIC17.14■□□□□ 0.33
CDH13P55290 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH13P55290 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH13P55290 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH13P55290 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH13P55290 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH13P55290 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDH13P55290 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH13P55290 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH13P55290 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH13P55290 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH13P55290 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH13P55290 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.13■□□□□ 0.33
CDH13P55290 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH13P55290 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH13P55290 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH13P55290 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 AL139327.4-201ENST00000612362 153 ntBASIC17.13■□□□□ 0.33
CDH13P55290 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH13P55290 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH13P55290 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH13P55290 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH13P55290 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH13P55290 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDH13P55290 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDH13P55290 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CDH13P55290 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDH13P55290 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDH13P55290 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH13P55290 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH13P55290 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH13P55290 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH13P55290 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH13P55290 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms