Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.65■□□□□ 0.26
NR1H2P55055 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.65■□□□□ 0.26
NR1H2P55055 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NR1H2P55055 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NR1H2P55055 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H2P55055 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H2P55055 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
NR1H2P55055 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NR1H2P55055 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.64■□□□□ 0.25
NR1H2P55055 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.64■□□□□ 0.25
NR1H2P55055 HYMAI-201ENST00000635591 3347 ntBASIC16.64■□□□□ 0.25
NR1H2P55055 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NR1H2P55055 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.64■□□□□ 0.25
NR1H2P55055 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.64■□□□□ 0.25
NR1H2P55055 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.64■□□□□ 0.25
NR1H2P55055 PRSS44-201ENST00000515154 1146 ntBASIC16.64■□□□□ 0.25
NR1H2P55055 AL353719.1-201ENST00000566847 864 ntBASIC16.64■□□□□ 0.25
NR1H2P55055 AL031432.5-201ENST00000641059 760 ntBASIC16.64■□□□□ 0.25
NR1H2P55055 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.64■□□□□ 0.25
NR1H2P55055 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NR1H2P55055 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NR1H2P55055 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NR1H2P55055 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
NR1H2P55055 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 INGX-201ENST00000359239 846 ntBASIC16.63■□□□□ 0.25
NR1H2P55055 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
NR1H2P55055 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.63■□□□□ 0.25
NR1H2P55055 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.63■□□□□ 0.25
NR1H2P55055 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 CKBP1-201ENST00000565489 1086 ntBASIC16.63■□□□□ 0.25
NR1H2P55055 AL023803.3-201ENST00000615559 522 ntBASIC16.63■□□□□ 0.25
NR1H2P55055 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NR1H2P55055 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.63■□□□□ 0.25
NR1H2P55055 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NR1H2P55055 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
NR1H2P55055 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 AC022188.1-201ENST00000620960 1664 ntBASIC16.62■□□□□ 0.25
NR1H2P55055 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.62■□□□□ 0.25
NR1H2P55055 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NR1H2P55055 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NR1H2P55055 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NR1H2P55055 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms