Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC17.38■□□□□ 0.37
NUBP1P53384 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC17.38■□□□□ 0.37
NUBP1P53384 AL138960.2-201ENST00000625145 535 ntBASIC17.38■□□□□ 0.37
NUBP1P53384 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
NUBP1P53384 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.38■□□□□ 0.37
NUBP1P53384 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUBP1P53384 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 FAM220BP-201ENST00000377689 816 ntBASIC17.37■□□□□ 0.37
NUBP1P53384 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 DEFT1P-201ENST00000453425 496 ntBASIC17.37■□□□□ 0.37
NUBP1P53384 AC082651.2-201ENST00000496833 166 ntBASIC17.37■□□□□ 0.37
NUBP1P53384 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 AP003041.2-201ENST00000525666 1180 ntBASIC17.37■□□□□ 0.37
NUBP1P53384 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.37■□□□□ 0.37
NUBP1P53384 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC17.37■□□□□ 0.37
NUBP1P53384 AC097655.1-201ENST00000635075 318 ntBASIC17.37■□□□□ 0.37
NUBP1P53384 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NUBP1P53384 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NUBP1P53384 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUBP1P53384 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC17.36■□□□□ 0.37
NUBP1P53384 ACTG1P4-201ENST00000425123 1122 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 SPCS2P4-201ENST00000436160 681 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.36■□□□□ 0.37
NUBP1P53384 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC17.36■□□□□ 0.37
NUBP1P53384 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC17.36■□□□□ 0.37
NUBP1P53384 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.36■□□□□ 0.37
NUBP1P53384 IGHV3-52-201ENST00000519770 353 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NUBP1P53384 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC17.36■□□□□ 0.37
NUBP1P53384 AL023583.1-201ENST00000607518 1143 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 AC019129.2-201ENST00000609837 1235 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.36■□□□□ 0.37
NUBP1P53384 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.36■□□□□ 0.37
NUBP1P53384 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 AC006480.2-201ENST00000609770 1337 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NUBP1P53384 AC009336.1-201ENST00000608941 1553 ntBASIC17.36■□□□□ 0.37
NUBP1P53384 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUBP1P53384 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
NUBP1P53384 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NUBP1P53384 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NUBP1P53384 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.35■□□□□ 0.37
NUBP1P53384 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.35■□□□□ 0.37
NUBP1P53384 AC092580.3-201ENST00000430932 139 ntBASIC17.35■□□□□ 0.37
NUBP1P53384 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.35■□□□□ 0.37
NUBP1P53384 DUTP2-201ENST00000519164 463 ntBASIC17.35■□□□□ 0.37
NUBP1P53384 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 LINC01225-203ENST00000563550 1244 ntBASIC17.35■□□□□ 0.37
NUBP1P53384 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC17.35■□□□□ 0.37
NUBP1P53384 TP53TG3HP-202ENST00000569755 579 ntBASIC17.35■□□□□ 0.37
NUBP1P53384 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NUBP1P53384 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUBP1P53384 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms