Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 MTDHP4-201ENST00000600287 670 ntBASIC17.17■□□□□ 0.34
CLCNKAP51800 LINC01451-201ENST00000623792 534 ntBASIC17.17■□□□□ 0.34
CLCNKAP51800 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLCNKAP51800 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLCNKAP51800 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 KLF4P1-201ENST00000412782 1185 ntBASIC17.16■□□□□ 0.34
CLCNKAP51800 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCNKAP51800 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCNKAP51800 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.16■□□□□ 0.34
CLCNKAP51800 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 BX640515.1-201ENST00000617215 977 ntBASIC17.16■□□□□ 0.34
CLCNKAP51800 AC107918.4-202ENST00000641623 219 ntBASIC17.16■□□□□ 0.34
CLCNKAP51800 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCNKAP51800 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CLCNKAP51800 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCNKAP51800 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCNKAP51800 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.15■□□□□ 0.34
CLCNKAP51800 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCNKAP51800 LAGE3P1-201ENST00000425356 484 ntBASIC17.15■□□□□ 0.34
CLCNKAP51800 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCNKAP51800 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 OR7E14P-202ENST00000530490 1290 ntBASIC17.15■□□□□ 0.34
CLCNKAP51800 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCNKAP51800 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCNKAP51800 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCNKAP51800 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCNKAP51800 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.15■□□□□ 0.34
CLCNKAP51800 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCNKAP51800 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLCNKAP51800 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLCNKAP51800 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 AL355312.1-201ENST00000407115 2176 ntBASIC17.14■□□□□ 0.33
CLCNKAP51800 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCNKAP51800 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.14■□□□□ 0.33
CLCNKAP51800 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCNKAP51800 SIGLEC30P-201ENST00000455569 941 ntBASIC17.14■□□□□ 0.33
CLCNKAP51800 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms