Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 BX276092.7-203ENST00000637198 1536 ntBASIC19.25■□□□□ 0.67
CDK7P50613 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 AC073592.3-201ENST00000625118 1834 ntBASIC19.25■□□□□ 0.67
CDK7P50613 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CDK7P50613 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK7P50613 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK7P50613 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 FAM185BP-201ENST00000443595 716 ntBASIC19.25■□□□□ 0.67
CDK7P50613 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.25■□□□□ 0.67
CDK7P50613 IGHV3-52-201ENST00000519770 353 ntBASIC19.25■□□□□ 0.67
CDK7P50613 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK7P50613 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK7P50613 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 AC005498.2-205ENST00000593218 784 ntBASIC19.25■□□□□ 0.67
CDK7P50613 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK7P50613 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK7P50613 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDK7P50613 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDK7P50613 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 DDX43P3-201ENST00000441064 443 ntBASIC19.24■□□□□ 0.67
CDK7P50613 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK7P50613 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDK7P50613 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CDK7P50613 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.24■□□□□ 0.67
CDK7P50613 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK7P50613 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.24■□□□□ 0.67
CDK7P50613 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK7P50613 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 AC005332.8-201ENST00000622750 2735 ntBASIC19.24■□□□□ 0.67
CDK7P50613 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 PI4KAP1-204ENST00000612579 1703 ntBASIC19.24■□□□□ 0.67
CDK7P50613 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK7P50613 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 AIRN-201ENST00000601203 4374 ntBASIC19.24■□□□□ 0.67
CDK7P50613 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK7P50613 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK7P50613 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK7P50613 AL590787.1-201ENST00000568856 1315 ntBASIC19.24■□□□□ 0.67
CDK7P50613 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK7P50613 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK7P50613 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK7P50613 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK7P50613 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CDK7P50613 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.23■□□□□ 0.67
CDK7P50613 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK7P50613 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CDK7P50613 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDK7P50613 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDK7P50613 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK7P50613 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK7P50613 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms