Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPT1AP50416 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.28■□□□□ 0.68
CPT1AP50416 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CPT1AP50416 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.27■□□□□ 0.68
CPT1AP50416 AC098818.2-201ENST00000564925 2320 ntBASIC19.27■□□□□ 0.68
CPT1AP50416 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 AC112191.1-201ENST00000523689 701 ntBASIC19.27■□□□□ 0.68
CPT1AP50416 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.27■□□□□ 0.68
CPT1AP50416 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.27■□□□□ 0.68
CPT1AP50416 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.27■□□□□ 0.68
CPT1AP50416 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.27■□□□□ 0.68
CPT1AP50416 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.27■□□□□ 0.68
CPT1AP50416 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CPT1AP50416 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.27■□□□□ 0.68
CPT1AP50416 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPT1AP50416 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPT1AP50416 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPT1AP50416 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPT1AP50416 AC129492.6-201ENST00000611383 1305 ntBASIC19.26■□□□□ 0.67
CPT1AP50416 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.26■□□□□ 0.67
CPT1AP50416 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 REXO1L11P-201ENST00000620964 1927 ntBASIC19.26■□□□□ 0.67
CPT1AP50416 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.26■□□□□ 0.67
CPT1AP50416 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
CPT1AP50416 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.26■□□□□ 0.67
CPT1AP50416 MIR3197-201ENST00000582241 73 ntBASIC19.26■□□□□ 0.67
CPT1AP50416 ACTL9-202ENST00000612068 1252 ntBASIC19.26■□□□□ 0.67
CPT1AP50416 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 AC105339.1-204ENST00000636249 355 ntBASIC19.26■□□□□ 0.67
CPT1AP50416 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
CPT1AP50416 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.26■□□□□ 0.67
CPT1AP50416 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPT1AP50416 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CPT1AP50416 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.26■□□□□ 0.67
CPT1AP50416 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
CPT1AP50416 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 AC138028.4-201ENST00000564984 1845 ntBASIC19.25■□□□□ 0.67
CPT1AP50416 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
CPT1AP50416 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.25■□□□□ 0.67
CPT1AP50416 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CPT1AP50416 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.25■□□□□ 0.67
CPT1AP50416 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.25■□□□□ 0.67
CPT1AP50416 AL139327.4-201ENST00000612362 153 ntBASIC19.25■□□□□ 0.67
CPT1AP50416 AC093028.1-201ENST00000622998 982 ntBASIC19.25■□□□□ 0.67
CPT1AP50416 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.25■□□□□ 0.67
CPT1AP50416 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPT1AP50416 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms