Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AC103564.2-201ENST00000432853 1299 ntBASIC19.55■□□□□ 0.72
CENPFP49454 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.55■□□□□ 0.72
CENPFP49454 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.55■□□□□ 0.72
CENPFP49454 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.55■□□□□ 0.72
CENPFP49454 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CENPFP49454 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CENPFP49454 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CENPFP49454 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CENPFP49454 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.54■□□□□ 0.72
CENPFP49454 AC069120.2-201ENST00000524091 540 ntBASIC19.54■□□□□ 0.72
CENPFP49454 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CENPFP49454 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.54■□□□□ 0.72
CENPFP49454 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPFP49454 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CENPFP49454 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.54■□□□□ 0.72
CENPFP49454 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CENPFP49454 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.54■□□□□ 0.72
CENPFP49454 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPFP49454 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.53■□□□□ 0.72
CENPFP49454 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.53■□□□□ 0.72
CENPFP49454 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CENPFP49454 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.53■□□□□ 0.72
CENPFP49454 AC079140.1-201ENST00000508039 487 ntBASIC19.53■□□□□ 0.72
CENPFP49454 IGHV3-71-201ENST00000523324 359 ntBASIC19.53■□□□□ 0.72
CENPFP49454 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CENPFP49454 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.53■□□□□ 0.72
CENPFP49454 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.53■□□□□ 0.72
CENPFP49454 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CENPFP49454 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.52■□□□□ 0.72
CENPFP49454 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.52■□□□□ 0.72
CENPFP49454 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.52■□□□□ 0.72
CENPFP49454 SPTSSB-204ENST00000617024 1292 ntBASIC19.52■□□□□ 0.72
CENPFP49454 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.52■□□□□ 0.72
CENPFP49454 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
CENPFP49454 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CENPFP49454 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CENPFP49454 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.52■□□□□ 0.72
CENPFP49454 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms