Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC9A3P48764 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC9A3P48764 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 CROCCP2-202ENST00000412962 2773 ntBASIC16.09■□□□□ 0.17
SLC9A3P48764 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC9A3P48764 PKD1P5-201ENST00000532415 10291 ntBASIC16.08■□□□□ 0.17
SLC9A3P48764 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC9A3P48764 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC9A3P48764 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC9A3P48764 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC9A3P48764 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC9A3P48764 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC9A3P48764 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC9A3P48764 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC9A3P48764 AC113347.1-201ENST00000413321 391 ntBASIC16.08■□□□□ 0.16
SLC9A3P48764 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC9A3P48764 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC9A3P48764 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC9A3P48764 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC9A3P48764 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 AC066615.1-201ENST00000640911 628 ntBASIC16.08■□□□□ 0.16
SLC9A3P48764 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.08■□□□□ 0.16
SLC9A3P48764 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 BX276092.7-203ENST00000637198 1536 ntBASIC16.08■□□□□ 0.16
SLC9A3P48764 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC9A3P48764 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SLC9A3P48764 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC9A3P48764 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC9A3P48764 REXO1L11P-201ENST00000620964 1927 ntBASIC16.07■□□□□ 0.16
SLC9A3P48764 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SLC9A3P48764 SPDYE15P-201ENST00000424157 909 ntBASIC16.07■□□□□ 0.16
SLC9A3P48764 AL137013.1-201ENST00000432946 1228 ntBASIC16.07■□□□□ 0.16
SLC9A3P48764 AC112698.1-201ENST00000510299 916 ntBASIC16.07■□□□□ 0.16
SLC9A3P48764 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC9A3P48764 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC9A3P48764 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC9A3P48764 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SLC9A3P48764 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC9A3P48764 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SLC9A3P48764 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SLC9A3P48764 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC9A3P48764 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SLC9A3P48764 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC9A3P48764 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SLC9A3P48764 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC9A3P48764 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.06■□□□□ 0.16
SLC9A3P48764 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC9A3P48764 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC9A3P48764 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC9A3P48764 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC9A3P48764 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms