Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
NEDD4P46934 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.57■□□□□ 0.88
NEDD4P46934 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.57■□□□□ 0.88
NEDD4P46934 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.57■□□□□ 0.88
NEDD4P46934 RPS2P1-201ENST00000434010 821 ntBASIC20.57■□□□□ 0.88
NEDD4P46934 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.57■□□□□ 0.88
NEDD4P46934 RNA5SP419-201ENST00000515908 135 ntBASIC20.57■□□□□ 0.88
NEDD4P46934 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.57■□□□□ 0.88
NEDD4P46934 MIR7706-201ENST00000613747 67 ntBASIC20.57■□□□□ 0.88
NEDD4P46934 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 AC139713.2-201ENST00000641328 2723 ntBASIC20.57■□□□□ 0.88
NEDD4P46934 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
NEDD4P46934 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.57■□□□□ 0.88
NEDD4P46934 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEDD4P46934 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NEDD4P46934 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NEDD4P46934 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.57■□□□□ 0.88
NEDD4P46934 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 AC141586.5-201ENST00000624546 2050 ntBASIC20.56■□□□□ 0.88
NEDD4P46934 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 SIGLEC30P-201ENST00000455569 941 ntBASIC20.56■□□□□ 0.88
NEDD4P46934 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.56■□□□□ 0.88
NEDD4P46934 AL049840.3-201ENST00000602669 611 ntBASIC20.56■□□□□ 0.88
NEDD4P46934 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
NEDD4P46934 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NEDD4P46934 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.56■□□□□ 0.88
NEDD4P46934 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.56■□□□□ 0.88
NEDD4P46934 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.56■□□□□ 0.88
NEDD4P46934 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.56■□□□□ 0.88
NEDD4P46934 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEDD4P46934 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 SLC25A1P3-201ENST00000395415 828 ntBASIC20.55■□□□□ 0.88
NEDD4P46934 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.55■□□□□ 0.88
NEDD4P46934 FDX1P1-201ENST00000449115 551 ntBASIC20.55■□□□□ 0.88
NEDD4P46934 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NEDD4P46934 AC073648.2-201ENST00000510116 352 ntBASIC20.55■□□□□ 0.88
NEDD4P46934 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.55■□□□□ 0.88
NEDD4P46934 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.55■□□□□ 0.88
NEDD4P46934 AC064862.7-201ENST00000604520 867 ntBASIC20.55■□□□□ 0.88
NEDD4P46934 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NEDD4P46934 FZD10-202ENST00000539839 3282 ntBASIC20.55■□□□□ 0.88
NEDD4P46934 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.55■□□□□ 0.88
NEDD4P46934 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.55■□□□□ 0.88
NEDD4P46934 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NEDD4P46934 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.55■□□□□ 0.88
NEDD4P46934 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.55■□□□□ 0.88
NEDD4P46934 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NEDD4P46934 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NEDD4P46934 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEDD4P46934 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NEDD4P46934 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NEDD4P46934 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.54■□□□□ 0.88
NEDD4P46934 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
NEDD4P46934 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEDD4P46934 AC026396.1-201ENST00000419388 421 ntBASIC20.54■□□□□ 0.88
NEDD4P46934 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms