Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNNT3P45378 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.98■□□□□ 0.63
TNNT3P45378 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNNT3P45378 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TNNT3P45378 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.97■□□□□ 0.63
TNNT3P45378 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 AC128688.1-201ENST00000487626 519 ntBASIC18.97■□□□□ 0.63
TNNT3P45378 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.97■□□□□ 0.63
TNNT3P45378 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TNNT3P45378 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TNNT3P45378 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.97■□□□□ 0.63
TNNT3P45378 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNNT3P45378 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNNT3P45378 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.96■□□□□ 0.63
TNNT3P45378 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
TNNT3P45378 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.96■□□□□ 0.63
TNNT3P45378 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.96■□□□□ 0.63
TNNT3P45378 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.96■□□□□ 0.63
TNNT3P45378 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.96■□□□□ 0.63
TNNT3P45378 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNNT3P45378 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNT3P45378 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNT3P45378 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNT3P45378 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TNNT3P45378 AL390955.1-201ENST00000428694 934 ntBASIC18.95■□□□□ 0.62
TNNT3P45378 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.95■□□□□ 0.62
TNNT3P45378 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNNT3P45378 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNNT3P45378 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.95■□□□□ 0.62
TNNT3P45378 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms