Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HTTP42858 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.45■□□□□ 0.7
HTTP42858 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.45■□□□□ 0.7
HTTP42858 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.45■□□□□ 0.7
HTTP42858 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.45■□□□□ 0.7
HTTP42858 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 AC138969.3-201ENST00000546612 1459 ntBASIC19.44■□□□□ 0.7
HTTP42858 AC138932.2-201ENST00000548268 1459 ntBASIC19.44■□□□□ 0.7
HTTP42858 AC126755.4-201ENST00000549796 1459 ntBASIC19.44■□□□□ 0.7
HTTP42858 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.44■□□□□ 0.7
HTTP42858 AL512384.1-201ENST00000406683 331 ntBASIC19.44■□□□□ 0.7
HTTP42858 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.44■□□□□ 0.7
HTTP42858 AL513480.1-201ENST00000451731 511 ntBASIC19.44■□□□□ 0.7
HTTP42858 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.44■□□□□ 0.7
HTTP42858 AC119751.2-201ENST00000504529 210 ntBASIC19.44■□□□□ 0.7
HTTP42858 AC017083.2-201ENST00000608069 979 ntBASIC19.44■□□□□ 0.7
HTTP42858 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.44■□□□□ 0.7
HTTP42858 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTTP42858 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 SPDYE7P-202ENST00000420373 878 ntBASIC19.43■□□□□ 0.7
HTTP42858 AC087163.2-201ENST00000457299 853 ntBASIC19.43■□□□□ 0.7
HTTP42858 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.43■□□□□ 0.7
HTTP42858 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HTTP42858 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HTTP42858 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.43■□□□□ 0.7
HTTP42858 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 IGHV3-42-201ENST00000520410 361 ntBASIC19.43■□□□□ 0.7
HTTP42858 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.43■□□□□ 0.7
HTTP42858 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.43■□□□□ 0.7
HTTP42858 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.43■□□□□ 0.7
HTTP42858 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.43■□□□□ 0.7
HTTP42858 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTTP42858 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HTTP42858 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 MIR6080-201ENST00000617359 66 ntBASIC19.42■□□□□ 0.7
HTTP42858 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HTTP42858 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 SLC25A6P5-201ENST00000435663 894 ntBASIC19.42■□□□□ 0.7
HTTP42858 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.42■□□□□ 0.7
HTTP42858 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.42■□□□□ 0.7
HTTP42858 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.42■□□□□ 0.7
HTTP42858 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTTP42858 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 KRT8P23-201ENST00000560090 1207 ntBASIC19.42■□□□□ 0.7
HTTP42858 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HTTP42858 SPDYE12P-201ENST00000618416 771 ntBASIC19.42■□□□□ 0.7
HTTP42858 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.42■□□□□ 0.7
HTTP42858 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.42■□□□□ 0.7
HTTP42858 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.41■□□□□ 0.7
HTTP42858 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HTTP42858 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.41■□□□□ 0.7
HTTP42858 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
HTTP42858 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.41■□□□□ 0.7
HTTP42858 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HTTP42858 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTTP42858 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms