Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RFC3P40938 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 AC098831.1-202ENST00000438821 336 ntBASIC16.03■□□□□ 0.16
RFC3P40938 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.03■□□□□ 0.16
RFC3P40938 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
RFC3P40938 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.03■□□□□ 0.16
RFC3P40938 AD001527.2-201ENST00000622994 785 ntBASIC16.03■□□□□ 0.16
RFC3P40938 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
RFC3P40938 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RFC3P40938 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RFC3P40938 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFC3P40938 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.03■□□□□ 0.16
RFC3P40938 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RFC3P40938 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC3P40938 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.02■□□□□ 0.16
RFC3P40938 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.02■□□□□ 0.16
RFC3P40938 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.02■□□□□ 0.16
RFC3P40938 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFC3P40938 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RFC3P40938 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.02■□□□□ 0.15
RFC3P40938 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC3P40938 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.02■□□□□ 0.15
RFC3P40938 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RFC3P40938 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC3P40938 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RFC3P40938 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.02■□□□□ 0.15
RFC3P40938 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 NOC2LP2-201ENST00000407594 1944 ntBASIC16.02■□□□□ 0.15
RFC3P40938 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFC3P40938 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFC3P40938 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 KRT18P58-201ENST00000527480 1120 ntBASIC16.01■□□□□ 0.15
RFC3P40938 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.01■□□□□ 0.15
RFC3P40938 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.01■□□□□ 0.15
RFC3P40938 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.01■□□□□ 0.15
RFC3P40938 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.01■□□□□ 0.15
RFC3P40938 AC109462.3-201ENST00000573934 613 ntBASIC16.01■□□□□ 0.15
RFC3P40938 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 AC008735.5-201ENST00000623544 497 ntBASIC16.01■□□□□ 0.15
RFC3P40938 AL022326.1-202ENST00000641533 845 ntBASIC16.01■□□□□ 0.15
RFC3P40938 AC107918.4-202ENST00000641623 219 ntBASIC16.01■□□□□ 0.15
RFC3P40938 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFC3P40938 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms