Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.61■□□□□ 0.41
MDH1P40925 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.61■□□□□ 0.41
MDH1P40925 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MDH1P40925 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.61■□□□□ 0.41
MDH1P40925 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.6■□□□□ 0.41
MDH1P40925 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 MIR935-201ENST00000401179 91 ntBASIC17.6■□□□□ 0.41
MDH1P40925 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.6■□□□□ 0.41
MDH1P40925 AC005104.2-201ENST00000427818 678 ntBASIC17.6■□□□□ 0.41
MDH1P40925 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 MIR4674-201ENST00000582457 87 ntBASIC17.6■□□□□ 0.41
MDH1P40925 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 AL031985.4-201ENST00000642138 673 ntBASIC17.6■□□□□ 0.41
MDH1P40925 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 AC093525.9-201ENST00000624961 1746 ntBASIC17.6■□□□□ 0.41
MDH1P40925 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.6■□□□□ 0.41
MDH1P40925 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MDH1P40925 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.6■□□□□ 0.41
MDH1P40925 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
MDH1P40925 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 AC092384.3-202ENST00000564646 2873 ntBASIC17.59■□□□□ 0.41
MDH1P40925 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MDH1P40925 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.59■□□□□ 0.41
MDH1P40925 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 KRASP1-201ENST00000407852 552 ntBASIC17.59■□□□□ 0.41
MDH1P40925 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 AP002982.1-201ENST00000492365 877 ntBASIC17.59■□□□□ 0.41
MDH1P40925 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.59■□□□□ 0.41
MDH1P40925 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
MDH1P40925 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
MDH1P40925 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MDH1P40925 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.58■□□□□ 0.41
MDH1P40925 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.58■□□□□ 0.41
MDH1P40925 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.58■□□□□ 0.41
MDH1P40925 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MDH1P40925 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms