Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 AC105339.1-204ENST00000636249 355 ntBASIC22.05■■□□□ 1.12
COL15A1P39059 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.05■■□□□ 1.12
COL15A1P39059 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.05■■□□□ 1.12
COL15A1P39059 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.05■■□□□ 1.12
COL15A1P39059 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL15A1P39059 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.05■■□□□ 1.12
COL15A1P39059 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.04■■□□□ 1.12
COL15A1P39059 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
COL15A1P39059 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.04■■□□□ 1.12
COL15A1P39059 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
COL15A1P39059 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC22.04■■□□□ 1.12
COL15A1P39059 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 AC022145.2-201ENST00000598203 171 ntBASIC22.04■■□□□ 1.12
COL15A1P39059 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
COL15A1P39059 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.04■■□□□ 1.12
COL15A1P39059 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 AC006116.8-202ENST00000587620 1550 ntBASIC22.04■■□□□ 1.12
COL15A1P39059 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.04■■□□□ 1.12
COL15A1P39059 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COL15A1P39059 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COL15A1P39059 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC22.03■■□□□ 1.12
COL15A1P39059 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
COL15A1P39059 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COL15A1P39059 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.03■■□□□ 1.12
COL15A1P39059 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC22.03■■□□□ 1.12
COL15A1P39059 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.03■■□□□ 1.12
COL15A1P39059 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.03■■□□□ 1.12
COL15A1P39059 AC093512.1-201ENST00000617969 520 ntBASIC22.03■■□□□ 1.12
COL15A1P39059 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.03■■□□□ 1.12
COL15A1P39059 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.03■■□□□ 1.12
COL15A1P39059 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COL15A1P39059 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.03■■□□□ 1.12
COL15A1P39059 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.02■■□□□ 1.12
COL15A1P39059 AL035633.1-201ENST00000406139 838 ntBASIC22.02■■□□□ 1.12
COL15A1P39059 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
COL15A1P39059 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.02■■□□□ 1.12
COL15A1P39059 AC023141.5-201ENST00000458585 616 ntBASIC22.02■■□□□ 1.12
COL15A1P39059 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.02■■□□□ 1.12
COL15A1P39059 ACTL9-202ENST00000612068 1252 ntBASIC22.02■■□□□ 1.12
COL15A1P39059 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL15A1P39059 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COL15A1P39059 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.02■■□□□ 1.12
COL15A1P39059 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL15A1P39059 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COL15A1P39059 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
COL15A1P39059 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.01■■□□□ 1.11
COL15A1P39059 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.01■■□□□ 1.11
COL15A1P39059 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL15A1P39059 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.01■■□□□ 1.11
COL15A1P39059 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.01■■□□□ 1.11
COL15A1P39059 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.01■■□□□ 1.11
COL15A1P39059 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.01■■□□□ 1.11
COL15A1P39059 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms