Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 LINC01451-201ENST00000623792 534 ntBASIC19.9■□□□□ 0.78
HOXA13P31271 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXA13P31271 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HOXA13P31271 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 HTR7P1-202ENST00000624664 4411 ntBASIC19.9■□□□□ 0.78
HOXA13P31271 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 AC046185.3-201ENST00000623228 1824 ntBASIC19.9■□□□□ 0.78
HOXA13P31271 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOXA13P31271 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
HOXA13P31271 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HOXA13P31271 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HOXA13P31271 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA13P31271 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 LINC00982-205ENST00000420957 435 ntBASIC19.89■□□□□ 0.77
HOXA13P31271 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 AC009947.1-201ENST00000444350 727 ntBASIC19.89■□□□□ 0.77
HOXA13P31271 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.89■□□□□ 0.77
HOXA13P31271 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXA13P31271 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXA13P31271 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXA13P31271 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HOXA13P31271 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXA13P31271 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.88■□□□□ 0.77
HOXA13P31271 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXA13P31271 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.88■□□□□ 0.77
HOXA13P31271 AL139424.1-201ENST00000607572 797 ntBASIC19.88■□□□□ 0.77
HOXA13P31271 AL139327.4-201ENST00000612362 153 ntBASIC19.88■□□□□ 0.77
HOXA13P31271 AC005593.1-201ENST00000624894 515 ntBASIC19.88■□□□□ 0.77
HOXA13P31271 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 AC134043.2-201ENST00000624206 2238 ntBASIC19.88■□□□□ 0.77
HOXA13P31271 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HOXA13P31271 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOXA13P31271 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOXA13P31271 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXA13P31271 AL133373.2-201ENST00000623187 2828 ntBASIC19.88■□□□□ 0.77
HOXA13P31271 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXA13P31271 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
HOXA13P31271 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.88■□□□□ 0.77
HOXA13P31271 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HOXA13P31271 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA13P31271 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA13P31271 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.87■□□□□ 0.77
HOXA13P31271 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXA13P31271 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.87■□□□□ 0.77
HOXA13P31271 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.87■□□□□ 0.77
HOXA13P31271 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HOXA13P31271 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA13P31271 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HOXA13P31271 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.87■□□□□ 0.77
HOXA13P31271 AL135999.2-201ENST00000622438 1686 ntBASIC19.87■□□□□ 0.77
HOXA13P31271 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOXA13P31271 LYSMD4-203ENST00000378904 2122 ntBASIC19.87■□□□□ 0.77
HOXA13P31271 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HOXA13P31271 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms