Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC093458.2-201ENST00000623150 629 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 AC046185.3-201ENST00000623228 1824 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN6P29350 Z83836.1-201ENST00000624605 1642 ntBASIC16.6■□□□□ 0.25
PTPN6P29350 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
PTPN6P29350 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
PTPN6P29350 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN6P29350 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.6■□□□□ 0.25
PTPN6P29350 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 BX276092.5-203ENST00000456199 560 ntBASIC16.6■□□□□ 0.25
PTPN6P29350 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 GPR32P1-201ENST00000601788 811 ntBASIC16.6■□□□□ 0.25
PTPN6P29350 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.6■□□□□ 0.25
PTPN6P29350 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.6■□□□□ 0.25
PTPN6P29350 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN6P29350 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PTPN6P29350 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN6P29350 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN6P29350 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PTPN6P29350 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN6P29350 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.59■□□□□ 0.25
PTPN6P29350 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN6P29350 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
PTPN6P29350 AC016734.2-201ENST00000624325 1377 ntBASIC16.59■□□□□ 0.25
PTPN6P29350 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN6P29350 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms