Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 AC106730.1-201ENST00000566722 1090 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 SIGLEC16-201ENST00000599858 1437 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.79□□□□□ -0.04
COL8A2P25067 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 AC008735.5-201ENST00000623544 497 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 AC073592.4-201ENST00000623827 446 ntBASIC14.79□□□□□ -0.04
COL8A2P25067 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.79□□□□□ -0.04
COL8A2P25067 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COL8A2P25067 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 AP002414.3-201ENST00000589352 1468 ntBASIC14.78□□□□□ -0.04
COL8A2P25067 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.78□□□□□ -0.04
COL8A2P25067 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
COL8A2P25067 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.78□□□□□ -0.04
COL8A2P25067 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.78□□□□□ -0.04
COL8A2P25067 AC105339.3-201ENST00000560043 636 ntBASIC14.78□□□□□ -0.04
COL8A2P25067 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.78□□□□□ -0.04
COL8A2P25067 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL8A2P25067 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL8A2P25067 AC148477.5-201ENST00000625164 1645 ntBASIC14.77□□□□□ -0.04
COL8A2P25067 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.77□□□□□ -0.04
COL8A2P25067 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.77□□□□□ -0.04
COL8A2P25067 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.77□□□□□ -0.04
COL8A2P25067 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.77□□□□□ -0.04
COL8A2P25067 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL8A2P25067 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
COL8A2P25067 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.77□□□□□ -0.05
COL8A2P25067 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.77□□□□□ -0.05
COL8A2P25067 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
COL8A2P25067 IGHV3-52-201ENST00000519770 353 ntBASIC14.77□□□□□ -0.05
COL8A2P25067 IGHV3-22-201ENST00000520721 359 ntBASIC14.77□□□□□ -0.05
COL8A2P25067 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.77□□□□□ -0.05
COL8A2P25067 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.77□□□□□ -0.05
COL8A2P25067 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL8A2P25067 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL8A2P25067 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL8A2P25067 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.77□□□□□ -0.05
COL8A2P25067 AC099398.1-201ENST00000567919 2776 ntBASIC14.77□□□□□ -0.05
COL8A2P25067 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL8A2P25067 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms