Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCND1P24385 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 TMPOP1-202ENST00000424642 1267 ntBASIC17.67■□□□□ 0.42
CCND1P24385 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.67■□□□□ 0.42
CCND1P24385 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.67■□□□□ 0.42
CCND1P24385 RN7SL850P-201ENST00000579959 291 ntBASIC17.67■□□□□ 0.42
CCND1P24385 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.67■□□□□ 0.42
CCND1P24385 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCND1P24385 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 CROCCP2-202ENST00000412962 2773 ntBASIC17.67■□□□□ 0.42
CCND1P24385 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CCND1P24385 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCND1P24385 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.66■□□□□ 0.42
CCND1P24385 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.66■□□□□ 0.42
CCND1P24385 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.66■□□□□ 0.42
CCND1P24385 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.66■□□□□ 0.42
CCND1P24385 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 KRT89P-201ENST00000620027 1478 ntBASIC17.66■□□□□ 0.42
CCND1P24385 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.66■□□□□ 0.42
CCND1P24385 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.66■□□□□ 0.42
CCND1P24385 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 LINC00554-201ENST00000564841 3011 ntBASIC17.66■□□□□ 0.42
CCND1P24385 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCND1P24385 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCND1P24385 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 AC068418.2-201ENST00000577309 3703 ntBASIC17.65■□□□□ 0.42
CCND1P24385 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.65■□□□□ 0.42
CCND1P24385 AC063952.2-201ENST00000498792 1227 ntBASIC17.65■□□□□ 0.42
CCND1P24385 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 AL136038.4-201ENST00000603606 1261 ntBASIC17.65■□□□□ 0.42
CCND1P24385 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.65■□□□□ 0.42
CCND1P24385 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCND1P24385 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCND1P24385 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
CCND1P24385 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.65■□□□□ 0.42
CCND1P24385 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.64■□□□□ 0.42
CCND1P24385 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCND1P24385 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCND1P24385 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.42
CCND1P24385 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CCND1P24385 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCND1P24385 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.64■□□□□ 0.41
CCND1P24385 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms