Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP11P24347 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP11P24347 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MMP11P24347 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
MMP11P24347 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP11P24347 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 PP12613-201ENST00000424958 2230 ntBASIC16.63■□□□□ 0.25
MMP11P24347 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 KRT18P55-202ENST00000578578 1546 ntBASIC16.63■□□□□ 0.25
MMP11P24347 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP11P24347 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP11P24347 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP11P24347 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.63■□□□□ 0.25
MMP11P24347 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 AL356309.3-201ENST00000624132 1934 ntBASIC16.62■□□□□ 0.25
MMP11P24347 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 SIRPAP1-201ENST00000448467 1770 ntBASIC16.62■□□□□ 0.25
MMP11P24347 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
MMP11P24347 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.62■□□□□ 0.25
MMP11P24347 AC122714.2-201ENST00000502787 707 ntBASIC16.62■□□□□ 0.25
MMP11P24347 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP11P24347 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP11P24347 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.62■□□□□ 0.25
MMP11P24347 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP11P24347 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 AL139288.1-201ENST00000623748 933 ntBASIC16.62■□□□□ 0.25
MMP11P24347 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.62■□□□□ 0.25
MMP11P24347 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP11P24347 IL9RP2-201ENST00000423948 1312 ntBASIC16.62■□□□□ 0.25
MMP11P24347 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MMP11P24347 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP11P24347 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MMP11P24347 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP11P24347 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
MMP11P24347 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MMP11P24347 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.61■□□□□ 0.25
MMP11P24347 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 SART3-203ENST00000546611 1184 ntBASIC16.61■□□□□ 0.25
MMP11P24347 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
MMP11P24347 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP11P24347 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 AP000867.4-201ENST00000641616 219 ntBASIC16.61■□□□□ 0.25
MMP11P24347 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MMP11P24347 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MMP11P24347 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.61■□□□□ 0.25
MMP11P24347 KRT8P47-201ENST00000604727 1398 ntBASIC16.61■□□□□ 0.25
MMP11P24347 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MMP11P24347 AC108860.2-201ENST00000562760 2183 ntBASIC16.61■□□□□ 0.25
MMP11P24347 PRORSD1P-202ENST00000563365 2154 ntBASIC16.61■□□□□ 0.25
MMP11P24347 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms