Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
VAMP1P23763 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
VAMP1P23763 AC068418.2-201ENST00000577309 3703 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.82□□□□□ -0.04
VAMP1P23763 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VAMP1P23763 AC005915.1-201ENST00000624912 2018 ntBASIC14.82□□□□□ -0.04
VAMP1P23763 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VAMP1P23763 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VAMP1P23763 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 KRT18P23-201ENST00000435622 1283 ntBASIC14.81□□□□□ -0.04
VAMP1P23763 NCF1B-203ENST00000435988 1254 ntBASIC14.81□□□□□ -0.04
VAMP1P23763 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.81□□□□□ -0.04
VAMP1P23763 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.81□□□□□ -0.04
VAMP1P23763 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 IKBKGP1-201ENST00000612193 1073 ntBASIC14.81□□□□□ -0.04
VAMP1P23763 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.81□□□□□ -0.04
VAMP1P23763 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.81□□□□□ -0.04
VAMP1P23763 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
VAMP1P23763 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.81□□□□□ -0.04
VAMP1P23763 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VAMP1P23763 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VAMP1P23763 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.8□□□□□ -0.04
VAMP1P23763 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
VAMP1P23763 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VAMP1P23763 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.8□□□□□ -0.04
VAMP1P23763 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.8□□□□□ -0.04
VAMP1P23763 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.8□□□□□ -0.04
VAMP1P23763 AC130371.2-201ENST00000619443 611 ntBASIC14.8□□□□□ -0.04
VAMP1P23763 CR392000.1-201ENST00000624770 1228 ntBASIC14.8□□□□□ -0.04
VAMP1P23763 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
VAMP1P23763 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 AL596257.1-201ENST00000641463 2694 ntBASIC14.8□□□□□ -0.04
VAMP1P23763 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.8□□□□□ -0.04
VAMP1P23763 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VAMP1P23763 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VAMP1P23763 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
VAMP1P23763 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms