Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NR4A1P22736 KRT8P3-201ENST00000519669 1449 ntBASIC16.31■□□□□ 0.2
NR4A1P22736 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 TERF1P1-201ENST00000311003 1181 ntBASIC16.31■□□□□ 0.2
NR4A1P22736 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 AC005521.1-201ENST00000393351 872 ntBASIC16.31■□□□□ 0.2
NR4A1P22736 RCN1P1-201ENST00000400413 996 ntBASIC16.31■□□□□ 0.2
NR4A1P22736 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.31■□□□□ 0.2
NR4A1P22736 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
NR4A1P22736 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
NR4A1P22736 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.31■□□□□ 0.2
NR4A1P22736 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.3■□□□□ 0.2
NR4A1P22736 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 KRT18P21-201ENST00000515767 1272 ntBASIC16.3■□□□□ 0.2
NR4A1P22736 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
NR4A1P22736 AL512604.3-201ENST00000569583 964 ntBASIC16.3■□□□□ 0.2
NR4A1P22736 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 AC092865.7-201ENST00000641832 219 ntBASIC16.3■□□□□ 0.2
NR4A1P22736 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NR4A1P22736 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.3■□□□□ 0.2
NR4A1P22736 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
NR4A1P22736 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 KRT18P55-202ENST00000578578 1546 ntBASIC16.29■□□□□ 0.2
NR4A1P22736 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 AC073508.3-201ENST00000619697 1419 ntBASIC16.29■□□□□ 0.2
NR4A1P22736 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.29■□□□□ 0.2
NR4A1P22736 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
NR4A1P22736 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.29■□□□□ 0.2
NR4A1P22736 ATP5G1P1-201ENST00000448724 379 ntBASIC16.29■□□□□ 0.2
NR4A1P22736 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NR4A1P22736 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.29■□□□□ 0.2
NR4A1P22736 AC010203.1-204ENST00000548782 407 ntBASIC16.29■□□□□ 0.2
NR4A1P22736 AC008622.2-201ENST00000617006 1229 ntBASIC16.29■□□□□ 0.2
NR4A1P22736 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms