Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ATP2A2P16615 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A2P16615 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2A2P16615 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.33■□□□□ 0.69
ATP2A2P16615 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2A2P16615 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2A2P16615 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2A2P16615 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 AC007967.3-201ENST00000434308 558 ntBASIC19.33■□□□□ 0.68
ATP2A2P16615 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ATP2A2P16615 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2A2P16615 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2A2P16615 C20orf181-201ENST00000623918 480 ntBASIC19.33■□□□□ 0.68
ATP2A2P16615 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A2P16615 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A2P16615 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 PMPCAP1-201ENST00000508114 1576 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2A2P16615 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 ANO7L1-203ENST00000602586 1720 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2A2P16615 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2A2P16615 AC004817.3-201ENST00000602957 2129 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 AC073592.4-201ENST00000623827 446 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 AC092865.6-201ENST00000642101 219 ntBASIC19.32■□□□□ 0.68
ATP2A2P16615 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A2P16615 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A2P16615 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A2P16615 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A2P16615 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.31■□□□□ 0.68
ATP2A2P16615 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A2P16615 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A2P16615 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A2P16615 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A2P16615 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 CRYGEP-201ENST00000412192 528 ntBASIC19.31■□□□□ 0.68
ATP2A2P16615 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A2P16615 PRYP5-201ENST00000451909 266 ntBASIC19.31■□□□□ 0.68
ATP2A2P16615 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A2P16615 AC106028.4-201ENST00000614509 607 ntBASIC19.31■□□□□ 0.68
ATP2A2P16615 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
ATP2A2P16615 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATP2A2P16615 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A2P16615 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms