Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 RNA5SP416-201ENST00000516838 111 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AC040169.1-201ENST00000565382 521 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AC019129.2-201ENST00000609837 1235 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 AC004706.3-202ENST00000621574 984 ntBASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40ALP0C0E4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 AC004817.3-201ENST00000602957 2129 ntBASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 NCF1C-201ENST00000438382 1427 ntBASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB40ALP0C0E4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 IGHV3-52-201ENST00000519770 353 ntBASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 OR6D1P-202ENST00000641007 5290 ntBASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40ALP0C0E4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB40ALP0C0E4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms