Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.11■□□□□ 0.17
THBS1P07996 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.11■□□□□ 0.17
THBS1P07996 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.11■□□□□ 0.17
THBS1P07996 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.11■□□□□ 0.17
THBS1P07996 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.11■□□□□ 0.17
THBS1P07996 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
THBS1P07996 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 AC046185.3-201ENST00000623228 1824 ntBASIC16.1■□□□□ 0.17
THBS1P07996 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.1■□□□□ 0.17
THBS1P07996 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
THBS1P07996 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
THBS1P07996 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.1■□□□□ 0.17
THBS1P07996 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
THBS1P07996 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.1■□□□□ 0.17
THBS1P07996 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
THBS1P07996 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
THBS1P07996 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.09■□□□□ 0.17
THBS1P07996 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
THBS1P07996 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
THBS1P07996 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
THBS1P07996 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.09■□□□□ 0.17
THBS1P07996 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
THBS1P07996 DUSP5P1-201ENST00000441325 1139 ntBASIC16.09■□□□□ 0.17
THBS1P07996 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
THBS1P07996 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.09■□□□□ 0.17
THBS1P07996 STK25P1-201ENST00000585406 838 ntBASIC16.09■□□□□ 0.17
THBS1P07996 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
THBS1P07996 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.09■□□□□ 0.17
THBS1P07996 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.09■□□□□ 0.17
THBS1P07996 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.09■□□□□ 0.17
THBS1P07996 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
THBS1P07996 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms