Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 AL135999.2-201ENST00000622438 1686 ntBASIC19.13■□□□□ 0.65
VTNP04004 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
VTNP04004 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VTNP04004 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VTNP04004 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 AC006116.8-202ENST00000587620 1550 ntBASIC19.12■□□□□ 0.65
VTNP04004 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.12■□□□□ 0.65
VTNP04004 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
VTNP04004 RPSAP43-201ENST00000402237 625 ntBASIC19.12■□□□□ 0.65
VTNP04004 UPF3AP3-201ENST00000420996 769 ntBASIC19.12■□□□□ 0.65
VTNP04004 GPX1P2-201ENST00000429271 606 ntBASIC19.12■□□□□ 0.65
VTNP04004 VN2R19P-201ENST00000442399 1052 ntBASIC19.12■□□□□ 0.65
VTNP04004 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.12■□□□□ 0.65
VTNP04004 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.12■□□□□ 0.65
VTNP04004 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.12■□□□□ 0.65
VTNP04004 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.12■□□□□ 0.65
VTNP04004 AC018845.2-201ENST00000568326 409 ntBASIC19.12■□□□□ 0.65
VTNP04004 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.12■□□□□ 0.65
VTNP04004 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VTNP04004 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
VTNP04004 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VTNP04004 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VTNP04004 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
VTNP04004 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.11■□□□□ 0.65
VTNP04004 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
VTNP04004 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
VTNP04004 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.11■□□□□ 0.65
VTNP04004 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 AC002347.1-201ENST00000569543 541 ntBASIC19.11■□□□□ 0.65
VTNP04004 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.11■□□□□ 0.65
VTNP04004 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTNP04004 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
VTNP04004 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.11■□□□□ 0.65
VTNP04004 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
VTNP04004 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
VTNP04004 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 LINC00304-203ENST00000565008 1864 ntBASIC19.1■□□□□ 0.65
VTNP04004 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
VTNP04004 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
VTNP04004 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.1■□□□□ 0.65
VTNP04004 ACTG1P4-201ENST00000425123 1122 ntBASIC19.1■□□□□ 0.65
VTNP04004 AC004832.2-201ENST00000426397 482 ntBASIC19.1■□□□□ 0.65
VTNP04004 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.1■□□□□ 0.65
VTNP04004 HCG4B-203ENST00000450128 991 ntBASIC19.1■□□□□ 0.65
VTNP04004 AC112482.1-201ENST00000492080 688 ntBASIC19.1■□□□□ 0.65
VTNP04004 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.1■□□□□ 0.65
VTNP04004 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.1■□□□□ 0.65
VTNP04004 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.1■□□□□ 0.65
VTNP04004 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms