Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.31■□□□□ 0.52
LMNAP02545 RNA5SP415-201ENST00000517246 115 ntBASIC18.31■□□□□ 0.52
LMNAP02545 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.31■□□□□ 0.52
LMNAP02545 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.31■□□□□ 0.52
LMNAP02545 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.31■□□□□ 0.52
LMNAP02545 AL596442.2-201ENST00000610240 980 ntBASIC18.31■□□□□ 0.52
LMNAP02545 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.31■□□□□ 0.52
LMNAP02545 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LMNAP02545 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LMNAP02545 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.31■□□□□ 0.52
LMNAP02545 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMNAP02545 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.3■□□□□ 0.52
LMNAP02545 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LMNAP02545 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.3■□□□□ 0.52
LMNAP02545 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.3■□□□□ 0.52
LMNAP02545 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LMNAP02545 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 AP001269.4-201ENST00000609611 512 ntBASIC18.3■□□□□ 0.52
LMNAP02545 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LMNAP02545 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.3■□□□□ 0.52
LMNAP02545 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.3■□□□□ 0.52
LMNAP02545 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMNAP02545 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LMNAP02545 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.29■□□□□ 0.52
LMNAP02545 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.29■□□□□ 0.52
LMNAP02545 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.29■□□□□ 0.52
LMNAP02545 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.29■□□□□ 0.52
LMNAP02545 MIR3180-4-201ENST00000582223 153 ntBASIC18.29■□□□□ 0.52
LMNAP02545 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.29■□□□□ 0.52
LMNAP02545 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LMNAP02545 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
LMNAP02545 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMNAP02545 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms