Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
GGPS1O95749 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
GGPS1O95749 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 AC005104.2-201ENST00000427818 678 ntBASIC19.61■□□□□ 0.73
GGPS1O95749 AC010327.4-202ENST00000591484 748 ntBASIC19.61■□□□□ 0.73
GGPS1O95749 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.61■□□□□ 0.73
GGPS1O95749 AC068880.1-201ENST00000507289 2297 ntBASIC19.61■□□□□ 0.73
GGPS1O95749 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.61■□□□□ 0.73
GGPS1O95749 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 AL133373.2-201ENST00000623187 2828 ntBASIC19.61■□□□□ 0.73
GGPS1O95749 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GGPS1O95749 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GGPS1O95749 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.6■□□□□ 0.73
GGPS1O95749 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 YBX2P1-201ENST00000394192 760 ntBASIC19.6■□□□□ 0.73
GGPS1O95749 AC023274.1-201ENST00000418278 595 ntBASIC19.6■□□□□ 0.73
GGPS1O95749 IGHV3-65-201ENST00000523210 341 ntBASIC19.6■□□□□ 0.73
GGPS1O95749 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.6■□□□□ 0.73
GGPS1O95749 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.6■□□□□ 0.73
GGPS1O95749 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GGPS1O95749 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.6■□□□□ 0.73
GGPS1O95749 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.6■□□□□ 0.73
GGPS1O95749 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GGPS1O95749 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.59■□□□□ 0.73
GGPS1O95749 LINC00982-205ENST00000420957 435 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 KRT18P2-201ENST00000447938 1258 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.59■□□□□ 0.73
GGPS1O95749 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 MIR4751-201ENST00000578027 74 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 AC008667.4-201ENST00000607370 168 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
GGPS1O95749 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.59■□□□□ 0.73
GGPS1O95749 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GGPS1O95749 AC005332.8-201ENST00000622750 2735 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 REXO1L11P-201ENST00000620964 1927 ntBASIC19.59■□□□□ 0.73
GGPS1O95749 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
GGPS1O95749 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
GGPS1O95749 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
GGPS1O95749 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.58■□□□□ 0.73
GGPS1O95749 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.58■□□□□ 0.73
GGPS1O95749 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
GGPS1O95749 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
GGPS1O95749 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.58■□□□□ 0.73
GGPS1O95749 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.58■□□□□ 0.73
GGPS1O95749 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
GGPS1O95749 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.58■□□□□ 0.73
GGPS1O95749 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
GGPS1O95749 CRYGEP-201ENST00000412192 528 ntBASIC19.58■□□□□ 0.72
GGPS1O95749 UPF3AP3-201ENST00000420996 769 ntBASIC19.58■□□□□ 0.72
GGPS1O95749 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
GGPS1O95749 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms