Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 FAM185BP-201ENST00000443595 716 ntBASIC22.94■■□□□ 1.26
LTN1O94822 RN7SL589P-201ENST00000481268 310 ntBASIC22.94■■□□□ 1.26
LTN1O94822 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.94■■□□□ 1.26
LTN1O94822 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
LTN1O94822 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.94■■□□□ 1.26
LTN1O94822 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.94■■□□□ 1.26
LTN1O94822 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LTN1O94822 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 AC051619.7-201ENST00000568314 623 ntBASIC22.94■■□□□ 1.26
LTN1O94822 AC015911.4-201ENST00000588022 1070 ntBASIC22.94■■□□□ 1.26
LTN1O94822 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.94■■□□□ 1.26
LTN1O94822 AL645728.2-201ENST00000641974 660 ntBASIC22.94■■□□□ 1.26
LTN1O94822 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
LTN1O94822 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
LTN1O94822 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
LTN1O94822 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.93■■□□□ 1.26
LTN1O94822 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC22.93■■□□□ 1.26
LTN1O94822 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LTN1O94822 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.93■■□□□ 1.26
LTN1O94822 COX20P2-201ENST00000452636 358 ntBASIC22.93■■□□□ 1.26
LTN1O94822 DUX4L17-201ENST00000557360 1267 ntBASIC22.93■■□□□ 1.26
LTN1O94822 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.93■■□□□ 1.26
LTN1O94822 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.93■■□□□ 1.26
LTN1O94822 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LTN1O94822 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LTN1O94822 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
LTN1O94822 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.93■■□□□ 1.26
LTN1O94822 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.92■■□□□ 1.26
LTN1O94822 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
LTN1O94822 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.92■■□□□ 1.26
LTN1O94822 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.92■■□□□ 1.26
LTN1O94822 AC067863.1-201ENST00000494933 530 ntBASIC22.92■■□□□ 1.26
LTN1O94822 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.92■■□□□ 1.26
LTN1O94822 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.92■■□□□ 1.26
LTN1O94822 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.92■■□□□ 1.26
LTN1O94822 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC22.92■■□□□ 1.26
LTN1O94822 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
LTN1O94822 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LTN1O94822 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
LTN1O94822 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.91■■□□□ 1.26
LTN1O94822 AC002056.1-201ENST00000395613 760 ntBASIC22.91■■□□□ 1.26
LTN1O94822 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
LTN1O94822 AC069335.1-201ENST00000489972 472 ntBASIC22.91■■□□□ 1.26
LTN1O94822 AC079140.1-201ENST00000508039 487 ntBASIC22.91■■□□□ 1.26
LTN1O94822 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.91■■□□□ 1.26
LTN1O94822 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.91■■□□□ 1.26
LTN1O94822 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
LTN1O94822 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 AC104581.1-202ENST00000635932 2618 ntBASIC22.91■■□□□ 1.26
LTN1O94822 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC22.91■■□□□ 1.26
LTN1O94822 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 BICD1-207ENST00000551848 1962 ntBASIC22.91■■□□□ 1.26
LTN1O94822 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 FAM58DP-201ENST00000428076 619 ntBASIC22.91■■□□□ 1.26
LTN1O94822 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.91■■□□□ 1.26
LTN1O94822 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
LTN1O94822 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.91■■□□□ 1.26
LTN1O94822 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.9■■□□□ 1.26
LTN1O94822 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.9■■□□□ 1.26
LTN1O94822 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
LTN1O94822 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
LTN1O94822 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms