Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TSPAN3O60637 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TSPAN3O60637 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.04■□□□□ 0.48
TSPAN3O60637 AP002414.3-201ENST00000589352 1468 ntBASIC18.04■□□□□ 0.48
TSPAN3O60637 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TSPAN3O60637 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.04■□□□□ 0.48
TSPAN3O60637 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.04■□□□□ 0.48
TSPAN3O60637 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.04■□□□□ 0.48
TSPAN3O60637 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.04■□□□□ 0.48
TSPAN3O60637 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.04■□□□□ 0.48
TSPAN3O60637 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TSPAN3O60637 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 HLA-J-201ENST00000462773 1622 ntBASIC18.04■□□□□ 0.48
TSPAN3O60637 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TSPAN3O60637 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TSPAN3O60637 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TSPAN3O60637 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TSPAN3O60637 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.03■□□□□ 0.48
TSPAN3O60637 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TSPAN3O60637 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TSPAN3O60637 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.03■□□□□ 0.48
TSPAN3O60637 SIGLEC30P-201ENST00000455569 941 ntBASIC18.03■□□□□ 0.48
TSPAN3O60637 AC002558.1-201ENST00000488906 803 ntBASIC18.03■□□□□ 0.48
TSPAN3O60637 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.03■□□□□ 0.48
TSPAN3O60637 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.03■□□□□ 0.48
TSPAN3O60637 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.03■□□□□ 0.48
TSPAN3O60637 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 AC006116.8-202ENST00000587620 1550 ntBASIC18.03■□□□□ 0.48
TSPAN3O60637 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TSPAN3O60637 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TSPAN3O60637 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TSPAN3O60637 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 PRYP5-201ENST00000451909 266 ntBASIC18.02■□□□□ 0.48
TSPAN3O60637 RPL13AP23-201ENST00000480739 586 ntBASIC18.02■□□□□ 0.48
TSPAN3O60637 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.02■□□□□ 0.48
TSPAN3O60637 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.02■□□□□ 0.48
TSPAN3O60637 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 AC105339.3-201ENST00000560043 636 ntBASIC18.02■□□□□ 0.48
TSPAN3O60637 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.02■□□□□ 0.48
TSPAN3O60637 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.02■□□□□ 0.48
TSPAN3O60637 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.02■□□□□ 0.48
TSPAN3O60637 AC023511.2-201ENST00000618803 211 ntBASIC18.02■□□□□ 0.48
TSPAN3O60637 AC008735.5-201ENST00000623544 497 ntBASIC18.02■□□□□ 0.48
TSPAN3O60637 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TSPAN3O60637 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
TSPAN3O60637 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TSPAN3O60637 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.02■□□□□ 0.47
TSPAN3O60637 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.02■□□□□ 0.47
TSPAN3O60637 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TSPAN3O60637 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TSPAN3O60637 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TSPAN3O60637 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TSPAN3O60637 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TSPAN3O60637 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TSPAN3O60637 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms