Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.83■□□□□ 0.28
GFRA3O60609 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 RHOQP1-201ENST00000555758 579 ntBASIC16.83■□□□□ 0.28
GFRA3O60609 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.83■□□□□ 0.28
GFRA3O60609 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GFRA3O60609 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.83■□□□□ 0.28
GFRA3O60609 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.82■□□□□ 0.28
GFRA3O60609 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 AC009336.1-201ENST00000608941 1553 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.82■□□□□ 0.28
GFRA3O60609 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.82■□□□□ 0.28
GFRA3O60609 GOLGA2P4-201ENST00000441462 777 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.82■□□□□ 0.28
GFRA3O60609 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 RN7SL837P-201ENST00000463010 287 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.82■□□□□ 0.28
GFRA3O60609 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 AC009407.1-201ENST00000568958 598 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 AP000842.3-202ENST00000569238 1080 ntBASIC16.82■□□□□ 0.28
GFRA3O60609 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.82■□□□□ 0.28
GFRA3O60609 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
GFRA3O60609 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GFRA3O60609 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GFRA3O60609 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.82■□□□□ 0.28
GFRA3O60609 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GFRA3O60609 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GFRA3O60609 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GFRA3O60609 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GFRA3O60609 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 MIR1908-201ENST00000410394 80 ntBASIC16.81■□□□□ 0.28
GFRA3O60609 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 GNAQP1-201ENST00000444815 1067 ntBASIC16.81■□□□□ 0.28
GFRA3O60609 HLA-V-204ENST00000476601 1289 ntBASIC16.81■□□□□ 0.28
GFRA3O60609 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 SLC25A6P2-201ENST00000497974 877 ntBASIC16.81■□□□□ 0.28
GFRA3O60609 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.81■□□□□ 0.28
GFRA3O60609 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 SNX29P1-201ENST00000548357 1007 ntBASIC16.81■□□□□ 0.28
GFRA3O60609 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.81■□□□□ 0.28
GFRA3O60609 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.81■□□□□ 0.28
GFRA3O60609 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.81■□□□□ 0.28
GFRA3O60609 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.81■□□□□ 0.28
GFRA3O60609 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.81■□□□□ 0.28
GFRA3O60609 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GFRA3O60609 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFRA3O60609 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.8■□□□□ 0.28
GFRA3O60609 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms