Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.17■□□□□ 0.34
DLX3O60479 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.17■□□□□ 0.34
DLX3O60479 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
DLX3O60479 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 RNF152P1-201ENST00000397754 604 ntBASIC17.17■□□□□ 0.34
DLX3O60479 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.17■□□□□ 0.34
DLX3O60479 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.17■□□□□ 0.34
DLX3O60479 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.17■□□□□ 0.34
DLX3O60479 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.17■□□□□ 0.34
DLX3O60479 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 Z83836.1-201ENST00000624605 1642 ntBASIC17.17■□□□□ 0.34
DLX3O60479 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.17■□□□□ 0.34
DLX3O60479 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.17■□□□□ 0.34
DLX3O60479 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
DLX3O60479 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.17■□□□□ 0.34
DLX3O60479 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
DLX3O60479 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.16■□□□□ 0.34
DLX3O60479 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.16■□□□□ 0.34
DLX3O60479 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
DLX3O60479 AC005521.1-201ENST00000393351 872 ntBASIC17.16■□□□□ 0.34
DLX3O60479 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.16■□□□□ 0.34
DLX3O60479 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.16■□□□□ 0.34
DLX3O60479 HOMER2P1-201ENST00000455653 964 ntBASIC17.16■□□□□ 0.34
DLX3O60479 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
DLX3O60479 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.16■□□□□ 0.34
DLX3O60479 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.16■□□□□ 0.34
DLX3O60479 AC019129.2-201ENST00000609837 1235 ntBASIC17.16■□□□□ 0.34
DLX3O60479 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.16■□□□□ 0.34
DLX3O60479 AC073912.3-201ENST00000624414 853 ntBASIC17.16■□□□□ 0.34
DLX3O60479 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.16■□□□□ 0.34
DLX3O60479 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
DLX3O60479 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
DLX3O60479 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DLX3O60479 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
DLX3O60479 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
DLX3O60479 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.15■□□□□ 0.34
DLX3O60479 SPDYE13P-201ENST00000445314 798 ntBASIC17.15■□□□□ 0.34
DLX3O60479 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.15■□□□□ 0.34
DLX3O60479 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
DLX3O60479 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.15■□□□□ 0.34
DLX3O60479 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
DLX3O60479 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
DLX3O60479 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.15■□□□□ 0.34
DLX3O60479 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DLX3O60479 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.15■□□□□ 0.34
DLX3O60479 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms