Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC011840.4-201ENST00000578471 627 ntBASIC19.63■□□□□ 0.73
ACTN4O43707 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ACTN4O43707 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.63■□□□□ 0.73
ACTN4O43707 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ACTN4O43707 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ACTN4O43707 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.62■□□□□ 0.73
ACTN4O43707 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.62■□□□□ 0.73
ACTN4O43707 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ACTN4O43707 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 AC016734.2-201ENST00000624325 1377 ntBASIC19.62■□□□□ 0.73
ACTN4O43707 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 MYCLP1-201ENST00000372451 1075 ntBASIC19.62■□□□□ 0.73
ACTN4O43707 AC246785.2-201ENST00000432512 513 ntBASIC19.62■□□□□ 0.73
ACTN4O43707 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.62■□□□□ 0.73
ACTN4O43707 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.62■□□□□ 0.73
ACTN4O43707 NTF6B-201ENST00000591913 560 ntBASIC19.62■□□□□ 0.73
ACTN4O43707 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ACTN4O43707 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.62■□□□□ 0.73
ACTN4O43707 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ACTN4O43707 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 KRT8P10-201ENST00000450021 1447 ntBASIC19.61■□□□□ 0.73
ACTN4O43707 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ACTN4O43707 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.61■□□□□ 0.73
ACTN4O43707 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.61■□□□□ 0.73
ACTN4O43707 IGHV3-52-201ENST00000519770 353 ntBASIC19.61■□□□□ 0.73
ACTN4O43707 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.61■□□□□ 0.73
ACTN4O43707 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.61■□□□□ 0.73
ACTN4O43707 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 LINC02012-201ENST00000608206 1725 ntBASIC19.61■□□□□ 0.73
ACTN4O43707 AC093525.9-201ENST00000624961 1746 ntBASIC19.61■□□□□ 0.73
ACTN4O43707 AC084018.2-201ENST00000613093 2607 ntBASIC19.61■□□□□ 0.73
ACTN4O43707 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ACTN4O43707 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ACTN4O43707 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ACTN4O43707 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ACTN4O43707 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.6■□□□□ 0.73
ACTN4O43707 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ACTN4O43707 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ACTN4O43707 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.6■□□□□ 0.73
ACTN4O43707 FAM220CP-201ENST00000395253 831 ntBASIC19.6■□□□□ 0.73
ACTN4O43707 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 CHCHD2P8-201ENST00000429873 447 ntBASIC19.6■□□□□ 0.73
ACTN4O43707 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ACTN4O43707 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.6■□□□□ 0.73
ACTN4O43707 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms