Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN9O14815 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CAPN9O14815 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN9O14815 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN9O14815 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN9O14815 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CAPN9O14815 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN9O14815 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN9O14815 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.51■□□□□ 0.55
CAPN9O14815 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.51■□□□□ 0.55
CAPN9O14815 MIR5100-201ENST00000579544 119 ntBASIC18.51■□□□□ 0.55
CAPN9O14815 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN9O14815 AL591684.3-201ENST00000605187 298 ntBASIC18.51■□□□□ 0.55
CAPN9O14815 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CAPN9O14815 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CAPN9O14815 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CAPN9O14815 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN9O14815 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN9O14815 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN9O14815 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 GNAS-203ENST00000306120 1878 ntBASIC18.5■□□□□ 0.55
CAPN9O14815 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
CAPN9O14815 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN9O14815 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN9O14815 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN9O14815 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
CAPN9O14815 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 INTS4P1-201ENST00000438455 1935 ntBASIC18.49■□□□□ 0.55
CAPN9O14815 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CAPN9O14815 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 TSPY19P-201ENST00000418461 509 ntBASIC18.49■□□□□ 0.55
CAPN9O14815 TSPY18P-201ENST00000441642 509 ntBASIC18.49■□□□□ 0.55
CAPN9O14815 AC122714.2-201ENST00000502787 707 ntBASIC18.49■□□□□ 0.55
CAPN9O14815 KRT18P31-201ENST00000506277 1292 ntBASIC18.49■□□□□ 0.55
CAPN9O14815 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN9O14815 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.49■□□□□ 0.55
CAPN9O14815 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN9O14815 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.49■□□□□ 0.55
CAPN9O14815 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CAPN9O14815 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.49■□□□□ 0.55
CAPN9O14815 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CAPN9O14815 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CAPN9O14815 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms