Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 DDX43P3-201ENST00000441064 443 ntBASIC17.06■□□□□ 0.32
C4orf47A7E2U8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AC005225.4-201ENST00000557330 545 ntBASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
C4orf47A7E2U8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 AC236430.1-201ENST00000402231 743 ntBASIC17.05■□□□□ 0.32
C4orf47A7E2U8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 TERF1P3-201ENST00000505638 1227 ntBASIC17.05■□□□□ 0.32
C4orf47A7E2U8 AC087641.1-201ENST00000557561 1021 ntBASIC17.05■□□□□ 0.32
C4orf47A7E2U8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C4orf47A7E2U8 AL031598.1-201ENST00000561511 1773 ntBASIC17.05■□□□□ 0.32
C4orf47A7E2U8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 AC097637.2-201ENST00000624096 1997 ntBASIC17.04■□□□□ 0.32
C4orf47A7E2U8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 TIMM8BP1-201ENST00000452384 211 ntBASIC17.04■□□□□ 0.32
C4orf47A7E2U8 CXCL1P1-201ENST00000502804 216 ntBASIC17.04■□□□□ 0.32
C4orf47A7E2U8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
C4orf47A7E2U8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C4orf47A7E2U8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms