Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TVP23AA6NH52 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TVP23AA6NH52 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AK4P3-201ENST00000418260 669 ntBASIC15.66■□□□□ 0.1
TVP23AA6NH52 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AC005332.3-201ENST00000589904 676 ntBASIC15.66■□□□□ 0.1
TVP23AA6NH52 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AC006011.2-201ENST00000621313 1158 ntBASIC15.66■□□□□ 0.1
TVP23AA6NH52 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TVP23AA6NH52 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TVP23AA6NH52 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.65■□□□□ 0.1
TVP23AA6NH52 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TVP23AA6NH52 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
TVP23AA6NH52 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TVP23AA6NH52 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TVP23AA6NH52 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TVP23AA6NH52 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TVP23AA6NH52 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms