Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 KLF4P1-201ENST00000412782 1185 ntBASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 LINC01711-201ENST00000598340 967 ntBASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC196A0A1B0GTZ2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC009336.1-201ENST00000608941 1553 ntBASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC132008.2-207ENST00000454517 770 ntBASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 CLEC4GP1-201ENST00000596555 870 ntBASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 PP12613-201ENST00000424958 2230 ntBASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 AL023806.1-201ENST00000603994 1649 ntBASIC20.35■□□□□ 0.85
CCDC196A0A1B0GTZ2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 CROCCP2-202ENST00000412962 2773 ntBASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC196A0A1B0GTZ2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC196A0A1B0GTZ2 AC106795.1-205ENST00000512851 1056 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms