Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VSIG4Q9Y279 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 AC138932.3-201ENST00000567634 1902 ntBASIC20.48■□□□□ 0.87
VSIG4Q9Y279 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSIG4Q9Y279 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSIG4Q9Y279 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.47■□□□□ 0.87
VSIG4Q9Y279 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.47■□□□□ 0.87
VSIG4Q9Y279 LINC00273-201ENST00000539813 1452 ntBASIC20.47■□□□□ 0.87
VSIG4Q9Y279 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VSIG4Q9Y279 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VSIG4Q9Y279 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VSIG4Q9Y279 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 AC022211.4-201ENST00000625094 2161 ntBASIC20.45■□□□□ 0.86
VSIG4Q9Y279 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSIG4Q9Y279 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VSIG4Q9Y279 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 MIR6090-201ENST00000622481 60 ntBASIC20.43■□□□□ 0.86
VSIG4Q9Y279 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.43■□□□□ 0.86
VSIG4Q9Y279 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 DUX4L29-201ENST00000425409 679 ntBASIC20.42■□□□□ 0.86
VSIG4Q9Y279 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.42■□□□□ 0.86
VSIG4Q9Y279 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VSIG4Q9Y279 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSIG4Q9Y279 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VSIG4Q9Y279 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VSIG4Q9Y279 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSIG4Q9Y279 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSIG4Q9Y279 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VSIG4Q9Y279 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.4■□□□□ 0.86
VSIG4Q9Y279 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.4■□□□□ 0.86
VSIG4Q9Y279 WHAMMP3-201ENST00000611636 1609 ntBASIC20.4■□□□□ 0.86
VSIG4Q9Y279 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.4■□□□□ 0.86
VSIG4Q9Y279 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.39■□□□□ 0.86
VSIG4Q9Y279 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSIG4Q9Y279 AC133561.1-201ENST00000568600 2415 ntBASIC20.39■□□□□ 0.85
VSIG4Q9Y279 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VSIG4Q9Y279 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSIG4Q9Y279 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
VSIG4Q9Y279 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 ABHD17AP4-201ENST00000411545 909 ntBASIC20.38■□□□□ 0.85
VSIG4Q9Y279 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.38■□□□□ 0.85
VSIG4Q9Y279 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VSIG4Q9Y279 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
VSIG4Q9Y279 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VSIG4Q9Y279 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.34■□□□□ 0.85
VSIG4Q9Y279 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.34■□□□□ 0.85
VSIG4Q9Y279 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.34■□□□□ 0.85
VSIG4Q9Y279 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VSIG4Q9Y279 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms