Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CAPN11Q9UMQ6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CAPN11Q9UMQ6 MIR219A2-201ENST00000608502 1504 ntBASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CAPN11Q9UMQ6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 AC148477.6-201ENST00000623746 465 ntBASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN11Q9UMQ6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CAPN11Q9UMQ6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CAPN11Q9UMQ6 AC142381.3-201ENST00000568208 1670 ntBASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN11Q9UMQ6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 AC096887.2-201ENST00000623443 1957 ntBASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN11Q9UMQ6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.29■■□□□ 1.8
CAPN11Q9UMQ6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CAPN11Q9UMQ6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.28■■□□□ 1.8
CAPN11Q9UMQ6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN11Q9UMQ6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN11Q9UMQ6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN11Q9UMQ6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CAPN11Q9UMQ6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CAPN11Q9UMQ6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CAPN11Q9UMQ6 DUX4L11-201ENST00000611504 1267 ntBASIC26.26■■□□□ 1.79
CAPN11Q9UMQ6 DUX4L12-201ENST00000614593 1267 ntBASIC26.26■■□□□ 1.79
CAPN11Q9UMQ6 DUX4L14-201ENST00000621227 1267 ntBASIC26.26■■□□□ 1.79
CAPN11Q9UMQ6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 AC022211.4-201ENST00000625094 2161 ntBASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 RPS2P35-201ENST00000443417 897 ntBASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CAPN11Q9UMQ6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CAPN11Q9UMQ6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 AL359504.2-201ENST00000605506 1601 ntBASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 AL359258.2-201ENST00000564063 1566 ntBASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CAPN11Q9UMQ6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.22■■□□□ 1.79
CAPN11Q9UMQ6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 HLA-V-202ENST00000446817 847 ntBASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 AC138932.3-201ENST00000567634 1902 ntBASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.21■■□□□ 1.79
CAPN11Q9UMQ6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CAPN11Q9UMQ6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CAPN11Q9UMQ6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CAPN11Q9UMQ6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.2■■□□□ 1.78
CAPN11Q9UMQ6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
CAPN11Q9UMQ6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.2■■□□□ 1.78
CAPN11Q9UMQ6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms