Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NLKQ9UBE8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NLKQ9UBE8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NLKQ9UBE8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NLKQ9UBE8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLKQ9UBE8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NLKQ9UBE8 ABHD17AP4-201ENST00000411545 909 ntBASIC21.38■■□□□ 1.01
NLKQ9UBE8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.38■■□□□ 1.01
NLKQ9UBE8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NLKQ9UBE8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLKQ9UBE8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NLKQ9UBE8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.37■■□□□ 1.01
NLKQ9UBE8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.37■■□□□ 1.01
NLKQ9UBE8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NLKQ9UBE8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.36■■□□□ 1.01
NLKQ9UBE8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NLKQ9UBE8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NLKQ9UBE8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NLKQ9UBE8 AP002414.2-202ENST00000590929 1450 ntBASIC21.35■■□□□ 1.01
NLKQ9UBE8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.35■■□□□ 1.01
NLKQ9UBE8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.35■■□□□ 1.01
NLKQ9UBE8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.35■■□□□ 1.01
NLKQ9UBE8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NLKQ9UBE8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NLKQ9UBE8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NLKQ9UBE8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NLKQ9UBE8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.34■■□□□ 1.01
NLKQ9UBE8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NLKQ9UBE8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NLKQ9UBE8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NLKQ9UBE8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.33■■□□□ 1.01
NLKQ9UBE8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NLKQ9UBE8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NLKQ9UBE8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.33■■□□□ 1.01
NLKQ9UBE8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NLKQ9UBE8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NLKQ9UBE8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.33■■□□□ 1
NLKQ9UBE8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
NLKQ9UBE8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NLKQ9UBE8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.32■■□□□ 1
NLKQ9UBE8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
NLKQ9UBE8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.32■■□□□ 1
NLKQ9UBE8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NLKQ9UBE8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NLKQ9UBE8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.32■■□□□ 1
NLKQ9UBE8 AC110285.7-201ENST00000624417 1536 ntBASIC21.31■■□□□ 1
NLKQ9UBE8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 DUX4L11-201ENST00000611504 1267 ntBASIC21.31■■□□□ 1
NLKQ9UBE8 DUX4L12-201ENST00000614593 1267 ntBASIC21.31■■□□□ 1
NLKQ9UBE8 DUX4L14-201ENST00000621227 1267 ntBASIC21.31■■□□□ 1
NLKQ9UBE8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.31■■□□□ 1
NLKQ9UBE8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.31■■□□□ 1
NLKQ9UBE8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.3■■□□□ 1
NLKQ9UBE8 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.3■■□□□ 1
NLKQ9UBE8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NLKQ9UBE8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NLKQ9UBE8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.29■■□□□ 1
NLKQ9UBE8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.29■■□□□ 1
NLKQ9UBE8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NLKQ9UBE8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NLKQ9UBE8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
NLKQ9UBE8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.28■■□□□ 1
NLKQ9UBE8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NLKQ9UBE8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.28■■□□□ 1
NLKQ9UBE8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NLKQ9UBE8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.28■■□□□ 1
NLKQ9UBE8 DUX4L13-201ENST00000554103 1267 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L15-201ENST00000611059 1267 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L23-201ENST00000615195 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L24-201ENST00000617576 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L22-201ENST00000618238 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L20-201ENST00000619712 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L21-201ENST00000622058 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L10-201ENST00000622460 1267 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 DUX4L25-201ENST00000624915 1269 ntBASIC21.27■■□□□ 1
NLKQ9UBE8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NLKQ9UBE8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NLKQ9UBE8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NLKQ9UBE8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.26■□□□□ 0.99
NLKQ9UBE8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NLKQ9UBE8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NLKQ9UBE8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NLKQ9UBE8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.26■□□□□ 0.99
NLKQ9UBE8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NLKQ9UBE8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NLKQ9UBE8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NLKQ9UBE8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.25■□□□□ 0.99
NLKQ9UBE8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NLKQ9UBE8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NLKQ9UBE8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms